Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
TRUB2O95900 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 HLA-F-220ENST00000434407 884 ntBASIC19.13■□□□□ 0.65
TRUB2O95900 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.13■□□□□ 0.65
TRUB2O95900 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.13■□□□□ 0.65
TRUB2O95900 AC087388.1-201ENST00000571370 1112 ntBASIC19.13■□□□□ 0.65
TRUB2O95900 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.13■□□□□ 0.65
TRUB2O95900 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.13■□□□□ 0.65
TRUB2O95900 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRUB2O95900 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRUB2O95900 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.13■□□□□ 0.65
TRUB2O95900 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRUB2O95900 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
TRUB2O95900 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRUB2O95900 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TRUB2O95900 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.12■□□□□ 0.65
TRUB2O95900 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.12■□□□□ 0.65
TRUB2O95900 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.12■□□□□ 0.65
TRUB2O95900 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.12■□□□□ 0.65
TRUB2O95900 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.12■□□□□ 0.65
TRUB2O95900 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB2O95900 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.12■□□□□ 0.65
TRUB2O95900 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRUB2O95900 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRUB2O95900 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB2O95900 PHGDH-209ENST00000641074 1780 ntBASIC19.11■□□□□ 0.65
TRUB2O95900 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRUB2O95900 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.11■□□□□ 0.65
TRUB2O95900 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRUB2O95900 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 ARMC10P1-201ENST00000313754 855 ntBASIC19.11■□□□□ 0.65
TRUB2O95900 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.11■□□□□ 0.65
TRUB2O95900 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.11■□□□□ 0.65
TRUB2O95900 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.11■□□□□ 0.65
TRUB2O95900 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.11■□□□□ 0.65
TRUB2O95900 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
TRUB2O95900 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
TRUB2O95900 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
TRUB2O95900 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRUB2O95900 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 AC018470.1-201ENST00000624790 3129 ntBASIC19.11■□□□□ 0.65
TRUB2O95900 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TRUB2O95900 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRUB2O95900 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.11■□□□□ 0.65
TRUB2O95900 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB2O95900 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.11■□□□□ 0.65
TRUB2O95900 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRUB2O95900 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRUB2O95900 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRUB2O95900 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.1■□□□□ 0.65
TRUB2O95900 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TRUB2O95900 ZNF444P1-201ENST00000559497 298 ntBASIC19.1■□□□□ 0.65
TRUB2O95900 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TRUB2O95900 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.1■□□□□ 0.65
TRUB2O95900 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms