Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LTN1O94822 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC24.1■■□□□ 1.45
LTN1O94822 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC24.09■■□□□ 1.45
LTN1O94822 AC093010.1-201ENST00000473625 1624 ntBASIC24.09■■□□□ 1.45
LTN1O94822 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
LTN1O94822 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC24.09■■□□□ 1.45
LTN1O94822 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 AC104109.2-201ENST00000602919 1418 ntBASIC24.09■■□□□ 1.45
LTN1O94822 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.09■■□□□ 1.45
LTN1O94822 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.09■■□□□ 1.45
LTN1O94822 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LTN1O94822 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LTN1O94822 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LTN1O94822 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC24.08■■□□□ 1.45
LTN1O94822 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LTN1O94822 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC24.08■■□□□ 1.45
LTN1O94822 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.08■■□□□ 1.45
LTN1O94822 FAM197Y3-203ENST00000618346 717 ntBASIC24.08■■□□□ 1.45
LTN1O94822 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LTN1O94822 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LTN1O94822 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.08■■□□□ 1.45
LTN1O94822 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LTN1O94822 ZNF259P1-201ENST00000407656 1365 ntBASIC24.08■■□□□ 1.45
LTN1O94822 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.08■■□□□ 1.45
LTN1O94822 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
LTN1O94822 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.08■■□□□ 1.44
LTN1O94822 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.08■■□□□ 1.44
LTN1O94822 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
LTN1O94822 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.08■■□□□ 1.44
LTN1O94822 HOTTIP_1.1-201ENST00000620415 57 ntBASIC24.08■■□□□ 1.44
LTN1O94822 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LTN1O94822 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC24.08■■□□□ 1.44
LTN1O94822 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
LTN1O94822 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
LTN1O94822 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC24.08■■□□□ 1.44
LTN1O94822 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
LTN1O94822 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC24.07■■□□□ 1.44
LTN1O94822 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LTN1O94822 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LTN1O94822 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
LTN1O94822 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LTN1O94822 FABP5-202ENST00000396359 986 ntTSL 5 BASIC24.07■■□□□ 1.44
LTN1O94822 AC107918.4-202ENST00000641623 219 ntBASIC24.07■■□□□ 1.44
LTN1O94822 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LTN1O94822 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.07■■□□□ 1.44
LTN1O94822 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.07■■□□□ 1.44
LTN1O94822 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.07■■□□□ 1.44
LTN1O94822 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
LTN1O94822 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.07■■□□□ 1.44
LTN1O94822 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LTN1O94822 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
LTN1O94822 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
LTN1O94822 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.06■■□□□ 1.44
LTN1O94822 AL591424.1-201ENST00000442569 1213 ntBASIC24.06■■□□□ 1.44
LTN1O94822 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.06■■□□□ 1.44
LTN1O94822 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC24.06■■□□□ 1.44
LTN1O94822 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.06■■□□□ 1.44
LTN1O94822 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.06■■□□□ 1.44
LTN1O94822 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC24.06■■□□□ 1.44
LTN1O94822 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC24.06■■□□□ 1.44
LTN1O94822 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
LTN1O94822 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
LTN1O94822 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
LTN1O94822 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 HLA-J-201ENST00000462773 1622 ntBASIC24.06■■□□□ 1.44
LTN1O94822 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
LTN1O94822 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC24.06■■□□□ 1.44
LTN1O94822 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 KIRREL3-AS3-201ENST00000404882 831 ntBASIC24.06■■□□□ 1.44
LTN1O94822 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LTN1O94822 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.06■■□□□ 1.44
LTN1O94822 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC24.06■■□□□ 1.44
LTN1O94822 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LTN1O94822 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.05■■□□□ 1.44
LTN1O94822 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
LTN1O94822 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LTN1O94822 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LTN1O94822 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
LTN1O94822 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LTN1O94822 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC24.05■■□□□ 1.44
LTN1O94822 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LTN1O94822 KRT18P27-201ENST00000427733 1299 ntBASIC24.05■■□□□ 1.44
LTN1O94822 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
LTN1O94822 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC24.05■■□□□ 1.44
LTN1O94822 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms