Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFPL1O75677 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.34■□□□□ 0.53
RFPL1O75677 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFPL1O75677 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.34■□□□□ 0.53
RFPL1O75677 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.34■□□□□ 0.53
RFPL1O75677 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.34■□□□□ 0.53
RFPL1O75677 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RFPL1O75677 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.34■□□□□ 0.53
RFPL1O75677 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFPL1O75677 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFPL1O75677 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.34■□□□□ 0.53
RFPL1O75677 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RFPL1O75677 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.34■□□□□ 0.53
RFPL1O75677 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFPL1O75677 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RFPL1O75677 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RFPL1O75677 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFPL1O75677 AC099343.3-201ENST00000605834 2503 ntBASIC18.33■□□□□ 0.53
RFPL1O75677 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
RFPL1O75677 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.33■□□□□ 0.53
RFPL1O75677 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFPL1O75677 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RFPL1O75677 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFPL1O75677 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFPL1O75677 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFPL1O75677 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.33■□□□□ 0.53
RFPL1O75677 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFPL1O75677 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.33■□□□□ 0.53
RFPL1O75677 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.33■□□□□ 0.53
RFPL1O75677 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RFPL1O75677 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFPL1O75677 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.33■□□□□ 0.53
RFPL1O75677 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RFPL1O75677 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
RFPL1O75677 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.33■□□□□ 0.52
RFPL1O75677 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.33■□□□□ 0.52
RFPL1O75677 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
RFPL1O75677 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.33■□□□□ 0.52
RFPL1O75677 AP000692.2-201ENST00000608391 879 ntBASIC18.33■□□□□ 0.52
RFPL1O75677 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.33■□□□□ 0.52
RFPL1O75677 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.33■□□□□ 0.52
RFPL1O75677 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.33■□□□□ 0.52
RFPL1O75677 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RFPL1O75677 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFPL1O75677 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RFPL1O75677 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFPL1O75677 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFPL1O75677 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.32■□□□□ 0.52
RFPL1O75677 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
RFPL1O75677 AC034236.2-201ENST00000606662 1610 ntBASIC18.32■□□□□ 0.52
RFPL1O75677 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.32■□□□□ 0.52
RFPL1O75677 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.32■□□□□ 0.52
RFPL1O75677 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RFPL1O75677 C2orf69P3-201ENST00000565542 1120 ntBASIC18.32■□□□□ 0.52
RFPL1O75677 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFPL1O75677 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 AL645608.8-201ENST00000606034 2086 ntBASIC18.32■□□□□ 0.52
RFPL1O75677 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.32■□□□□ 0.52
RFPL1O75677 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL1O75677 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.32■□□□□ 0.52
RFPL1O75677 AC012317.2-201ENST00000623305 2251 ntBASIC18.32■□□□□ 0.52
RFPL1O75677 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFPL1O75677 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFPL1O75677 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL1O75677 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL1O75677 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL1O75677 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL1O75677 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RFPL1O75677 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL1O75677 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.31■□□□□ 0.52
RFPL1O75677 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL1O75677 MCCD1P1-208ENST00000445732 328 ntBASIC18.31■□□□□ 0.52
RFPL1O75677 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.31■□□□□ 0.52
RFPL1O75677 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.31■□□□□ 0.52
RFPL1O75677 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.31■□□□□ 0.52
RFPL1O75677 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.31■□□□□ 0.52
RFPL1O75677 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFPL1O75677 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms