Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPNE3O75131 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE3O75131 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE3O75131 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE3O75131 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE3O75131 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE3O75131 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CPNE3O75131 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE3O75131 PRELID1P1-202ENST00000567272 903 ntBASIC17.52■□□□□ 0.4
CPNE3O75131 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CPNE3O75131 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.52■□□□□ 0.4
CPNE3O75131 AP002414.4-201ENST00000589764 1148 ntBASIC17.52■□□□□ 0.4
CPNE3O75131 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE3O75131 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE3O75131 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE3O75131 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE3O75131 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
CPNE3O75131 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CPNE3O75131 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE3O75131 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.52■□□□□ 0.39
CPNE3O75131 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
CPNE3O75131 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CPNE3O75131 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE3O75131 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE3O75131 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE3O75131 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE3O75131 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.51■□□□□ 0.39
CPNE3O75131 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE3O75131 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE3O75131 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CPNE3O75131 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE3O75131 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.51■□□□□ 0.39
CPNE3O75131 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPNE3O75131 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CPNE3O75131 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CPNE3O75131 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE3O75131 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE3O75131 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE3O75131 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
CPNE3O75131 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE3O75131 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE3O75131 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE3O75131 AP003733.1-201ENST00000491725 852 ntBASIC17.5■□□□□ 0.39
CPNE3O75131 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE3O75131 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CPNE3O75131 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 AC012313.10-201ENST00000623509 926 ntBASIC17.5■□□□□ 0.39
CPNE3O75131 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CPNE3O75131 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CPNE3O75131 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE3O75131 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE3O75131 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE3O75131 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CPNE3O75131 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE3O75131 KRT18P1-202ENST00000452408 1331 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 AL357033.4-201ENST00000617703 1807 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms