Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 KRT18P57-201ENST00000443599 1254 ntBASIC17.57■□□□□ 0.4
PRAMEF4O60810 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 COX11P1-201ENST00000489116 835 ntBASIC17.57■□□□□ 0.4
PRAMEF4O60810 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 AC009065.1-201ENST00000564055 1225 ntBASIC17.57■□□□□ 0.4
PRAMEF4O60810 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 AC132938.6-201ENST00000623828 1655 ntBASIC17.56■□□□□ 0.4
PRAMEF4O60810 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 SPDYE15P-201ENST00000424157 909 ntBASIC17.56■□□□□ 0.4
PRAMEF4O60810 LIN28AP1-201ENST00000429574 405 ntBASIC17.56■□□□□ 0.4
PRAMEF4O60810 PVRIG2P-201ENST00000435460 978 ntBASIC17.56■□□□□ 0.4
PRAMEF4O60810 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 YBX1P2-201ENST00000489612 999 ntBASIC17.56■□□□□ 0.4
PRAMEF4O60810 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 AC006011.2-201ENST00000621313 1158 ntBASIC17.56■□□□□ 0.4
PRAMEF4O60810 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 FLJ13224-201ENST00000313737 1514 ntBASIC17.56■□□□□ 0.4
PRAMEF4O60810 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF4O60810 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF4O60810 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 ATP5G1P1-201ENST00000448724 379 ntBASIC17.55■□□□□ 0.4
PRAMEF4O60810 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 RASA4DP-201ENST00000460726 1199 ntBASIC17.55■□□□□ 0.4
PRAMEF4O60810 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF4O60810 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEF4O60810 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 BX664615.1-201ENST00000443558 458 ntBASIC17.54■□□□□ 0.4
PRAMEF4O60810 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 AC140113.3-201ENST00000605663 199 ntBASIC17.54■□□□□ 0.4
PRAMEF4O60810 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF4O60810 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms