Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MIR662-201ENST00000384847 95 ntBASIC17.45■□□□□ 0.38
LCMT2O60294 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.45■□□□□ 0.38
LCMT2O60294 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.45■□□□□ 0.38
LCMT2O60294 KRT18P35-201ENST00000510488 1269 ntBASIC17.45■□□□□ 0.38
LCMT2O60294 ZNF444P1-201ENST00000559497 298 ntBASIC17.45■□□□□ 0.38
LCMT2O60294 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.45■□□□□ 0.38
LCMT2O60294 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.45■□□□□ 0.38
LCMT2O60294 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LCMT2O60294 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.45■□□□□ 0.38
LCMT2O60294 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
LCMT2O60294 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LCMT2O60294 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LCMT2O60294 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 AL096828.2-201ENST00000567259 1965 ntBASIC17.44■□□□□ 0.38
LCMT2O60294 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 AL354751.1-201ENST00000412768 1863 ntBASIC17.44■□□□□ 0.38
LCMT2O60294 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.44■□□□□ 0.38
LCMT2O60294 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.44■□□□□ 0.38
LCMT2O60294 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.44■□□□□ 0.38
LCMT2O60294 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.44■□□□□ 0.38
LCMT2O60294 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.44■□□□□ 0.38
LCMT2O60294 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.44■□□□□ 0.38
LCMT2O60294 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.44■□□□□ 0.38
LCMT2O60294 AL445228.2-201ENST00000605589 952 ntBASIC17.44■□□□□ 0.38
LCMT2O60294 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.44■□□□□ 0.38
LCMT2O60294 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.44■□□□□ 0.38
LCMT2O60294 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
LCMT2O60294 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
LCMT2O60294 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LCMT2O60294 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LCMT2O60294 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.44■□□□□ 0.38
LCMT2O60294 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LCMT2O60294 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 ABALON-201ENST00000629058 1903 ntBASIC17.43■□□□□ 0.38
LCMT2O60294 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.43■□□□□ 0.38
LCMT2O60294 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.43■□□□□ 0.38
LCMT2O60294 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.43■□□□□ 0.38
LCMT2O60294 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.43■□□□□ 0.38
LCMT2O60294 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.43■□□□□ 0.38
LCMT2O60294 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.43■□□□□ 0.38
LCMT2O60294 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.43■□□□□ 0.38
LCMT2O60294 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.43■□□□□ 0.38
LCMT2O60294 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.43■□□□□ 0.38
LCMT2O60294 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.43■□□□□ 0.38
LCMT2O60294 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
LCMT2O60294 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LCMT2O60294 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LCMT2O60294 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.43■□□□□ 0.38
LCMT2O60294 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.43■□□□□ 0.38
LCMT2O60294 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 REXO1L9P-201ENST00000604264 2108 ntBASIC17.42■□□□□ 0.38
LCMT2O60294 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.42■□□□□ 0.38
LCMT2O60294 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.42■□□□□ 0.38
LCMT2O60294 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LCMT2O60294 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms