Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH7O60245 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDH7O60245 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDH7O60245 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 AC008764.6-201ENST00000595909 2069 ntBASIC17.45■□□□□ 0.38
PCDH7O60245 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDH7O60245 AL512604.3-201ENST00000569583 964 ntBASIC17.45■□□□□ 0.38
PCDH7O60245 AC010240.3-201ENST00000607688 395 ntBASIC17.45■□□□□ 0.38
PCDH7O60245 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDH7O60245 AC066615.1-201ENST00000640911 628 ntBASIC17.45■□□□□ 0.38
PCDH7O60245 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH7O60245 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH7O60245 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH7O60245 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDH7O60245 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDH7O60245 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
PCDH7O60245 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDH7O60245 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDH7O60245 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDH7O60245 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH7O60245 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDH7O60245 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH7O60245 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH7O60245 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 LINC01568-207ENST00000641790 1380 ntBASIC17.43■□□□□ 0.38
PCDH7O60245 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 FLJ13224-201ENST00000313737 1514 ntBASIC17.43■□□□□ 0.38
PCDH7O60245 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDH7O60245 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 AC024243.1-201ENST00000609234 778 ntBASIC17.43■□□□□ 0.38
PCDH7O60245 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms