Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.38■□□□□ 0.53
NPC1O15118 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.38■□□□□ 0.53
NPC1O15118 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.38■□□□□ 0.53
NPC1O15118 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 KRT18P65-201ENST00000439811 1286 ntBASIC18.38■□□□□ 0.53
NPC1O15118 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.38■□□□□ 0.53
NPC1O15118 AC009533.2-201ENST00000543664 586 ntBASIC18.38■□□□□ 0.53
NPC1O15118 MIR5100-201ENST00000579544 119 ntBASIC18.38■□□□□ 0.53
NPC1O15118 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.37■□□□□ 0.53
NPC1O15118 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
NPC1O15118 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.37■□□□□ 0.53
NPC1O15118 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
NPC1O15118 AC009078.2-202ENST00000463353 338 ntBASIC18.37■□□□□ 0.53
NPC1O15118 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.37■□□□□ 0.53
NPC1O15118 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.37■□□□□ 0.53
NPC1O15118 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.37■□□□□ 0.53
NPC1O15118 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.37■□□□□ 0.53
NPC1O15118 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.37■□□□□ 0.53
NPC1O15118 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
NPC1O15118 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPC1O15118 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.37■□□□□ 0.53
NPC1O15118 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPC1O15118 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPC1O15118 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.36■□□□□ 0.53
NPC1O15118 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPC1O15118 AKR1C7P-201ENST00000305623 895 ntBASIC18.36■□□□□ 0.53
NPC1O15118 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPC1O15118 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
NPC1O15118 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPC1O15118 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.36■□□□□ 0.53
NPC1O15118 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPC1O15118 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPC1O15118 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPC1O15118 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.36■□□□□ 0.53
NPC1O15118 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPC1O15118 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.36■□□□□ 0.53
NPC1O15118 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.36■□□□□ 0.53
NPC1O15118 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.36■□□□□ 0.53
NPC1O15118 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPC1O15118 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPC1O15118 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.35■□□□□ 0.53
NPC1O15118 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 MTCL1P1-201ENST00000446207 792 ntBASIC18.35■□□□□ 0.53
NPC1O15118 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.35■□□□□ 0.53
NPC1O15118 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.35■□□□□ 0.53
NPC1O15118 AC096582.2-201ENST00000510860 516 ntBASIC18.35■□□□□ 0.53
NPC1O15118 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.35■□□□□ 0.53
NPC1O15118 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.35■□□□□ 0.53
NPC1O15118 SLC25A6P4-201ENST00000586535 553 ntBASIC18.35■□□□□ 0.53
NPC1O15118 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.35■□□□□ 0.53
NPC1O15118 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPC1O15118 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPC1O15118 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.35■□□□□ 0.53
NPC1O15118 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPC1O15118 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.34■□□□□ 0.53
NPC1O15118 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NPC1O15118 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPC1O15118 AC093503.3-201ENST00000624917 2352 ntBASIC18.34■□□□□ 0.53
NPC1O15118 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPC1O15118 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NPC1O15118 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPC1O15118 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPC1O15118 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPC1O15118 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.34■□□□□ 0.53
NPC1O15118 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms