Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD2O14647 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC25.25■■□□□ 1.63
CHD2O14647 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD2O14647 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CHD2O14647 AC005593.1-201ENST00000624894 515 ntBASIC25.25■■□□□ 1.63
CHD2O14647 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD2O14647 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC25.25■■□□□ 1.63
CHD2O14647 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC25.24■■□□□ 1.63
CHD2O14647 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC25.24■■□□□ 1.63
CHD2O14647 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
CHD2O14647 SNHG9-202ENST00000564014 471 ntBASIC25.24■■□□□ 1.63
CHD2O14647 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
CHD2O14647 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 MYLKP1-201ENST00000509077 1580 ntBASIC25.24■■□□□ 1.63
CHD2O14647 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC25.24■■□□□ 1.63
CHD2O14647 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD2O14647 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC25.23■■□□□ 1.63
CHD2O14647 COX20P2-201ENST00000452636 358 ntBASIC25.23■■□□□ 1.63
CHD2O14647 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD2O14647 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD2O14647 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD2O14647 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD2O14647 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD2O14647 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD2O14647 AL157384.1-201ENST00000445995 2473 ntBASIC25.23■■□□□ 1.63
CHD2O14647 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD2O14647 MIR770-201ENST00000390219 98 ntBASIC25.23■■□□□ 1.63
CHD2O14647 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC25.23■■□□□ 1.63
CHD2O14647 PRYP5-201ENST00000451909 266 ntBASIC25.23■■□□□ 1.63
CHD2O14647 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CHD2O14647 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC25.23■■□□□ 1.63
CHD2O14647 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CHD2O14647 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CHD2O14647 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD2O14647 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.23■■□□□ 1.63
CHD2O14647 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHD2O14647 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC25.23■■□□□ 1.63
CHD2O14647 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC25.23■■□□□ 1.63
CHD2O14647 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.22■■□□□ 1.63
CHD2O14647 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.22■■□□□ 1.63
CHD2O14647 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD2O14647 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CHD2O14647 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC25.22■■□□□ 1.63
CHD2O14647 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.22■■□□□ 1.63
CHD2O14647 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CHD2O14647 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD2O14647 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CHD2O14647 AC096633.1-201ENST00000422446 749 ntBASIC25.22■■□□□ 1.63
CHD2O14647 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD2O14647 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD2O14647 AL137060.1-201ENST00000618151 2648 ntBASIC25.22■■□□□ 1.63
CHD2O14647 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC25.22■■□□□ 1.63
CHD2O14647 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.21■■□□□ 1.63
CHD2O14647 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
CHD2O14647 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 SYS1-203ENST00000414310 795 ntTSL 3 BASIC25.21■■□□□ 1.63
CHD2O14647 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC25.21■■□□□ 1.63
CHD2O14647 GOLGA6L17P-202ENST00000614358 1398 ntBASIC25.21■■□□□ 1.63
CHD2O14647 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CHD2O14647 GPR89P-201ENST00000407924 1495 ntBASIC25.21■■□□□ 1.63
CHD2O14647 MED29-202ENST00000594368 1471 ntTSL 2 BASIC25.21■■□□□ 1.63
CHD2O14647 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CHD2O14647 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC25.21■■□□□ 1.63
CHD2O14647 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.21■■□□□ 1.63
CHD2O14647 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC25.21■■□□□ 1.63
CHD2O14647 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.21■■□□□ 1.63
CHD2O14647 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHD2O14647 LHX6-205ENST00000464484 666 ntTSL 2 BASIC25.21■■□□□ 1.63
CHD2O14647 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC25.21■■□□□ 1.63
CHD2O14647 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD2O14647 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
CHD2O14647 ADM-208ENST00000534464 1640 ntTSL 2 BASIC25.2■■□□□ 1.63
CHD2O14647 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC25.2■■□□□ 1.63
CHD2O14647 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD2O14647 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
CHD2O14647 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CHD2O14647 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD2O14647 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms