Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP3D1O14617 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP3D1O14617 UNC93B2-201ENST00000285383 730 ntBASIC17.1■□□□□ 0.33
AP3D1O14617 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.1■□□□□ 0.33
AP3D1O14617 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.1■□□□□ 0.33
AP3D1O14617 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AP3D1O14617 AL355075.4-201ENST00000554988 638 ntBASIC17.1■□□□□ 0.33
AP3D1O14617 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3D1O14617 AP005242.2-201ENST00000580065 1175 ntBASIC17.1■□□□□ 0.33
AP3D1O14617 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.1■□□□□ 0.33
AP3D1O14617 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AP3D1O14617 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
AP3D1O14617 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
AP3D1O14617 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3D1O14617 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 AL109659.2-201ENST00000606809 1674 ntBASIC17.1■□□□□ 0.33
AP3D1O14617 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.1■□□□□ 0.33
AP3D1O14617 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3D1O14617 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3D1O14617 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.09■□□□□ 0.33
AP3D1O14617 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
AP3D1O14617 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3D1O14617 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3D1O14617 AL023284.2-201ENST00000405850 579 ntBASIC17.09■□□□□ 0.33
AP3D1O14617 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
AP3D1O14617 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 TSPY15P-201ENST00000457163 923 ntBASIC17.09■□□□□ 0.33
AP3D1O14617 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3D1O14617 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
AP3D1O14617 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3D1O14617 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.09■□□□□ 0.33
AP3D1O14617 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP3D1O14617 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.09■□□□□ 0.33
AP3D1O14617 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3D1O14617 MYLKP1-201ENST00000509077 1580 ntBASIC17.09■□□□□ 0.33
AP3D1O14617 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3D1O14617 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3D1O14617 TNRC18P3-201ENST00000441896 2691 ntBASIC17.09■□□□□ 0.33
AP3D1O14617 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
AP3D1O14617 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
AP3D1O14617 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3D1O14617 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3D1O14617 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.08■□□□□ 0.33
AP3D1O14617 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
AP3D1O14617 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
AP3D1O14617 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP3D1O14617 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3D1O14617 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
AP3D1O14617 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
AP3D1O14617 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AP3D1O14617 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
AP3D1O14617 MIR4674-201ENST00000582457 87 ntBASIC17.08■□□□□ 0.32
AP3D1O14617 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
AP3D1O14617 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3D1O14617 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
AP3D1O14617 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3D1O14617 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3D1O14617 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
AP3D1O14617 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms