Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.44■□□□□ 0.38
RTCAO00442 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 PHGDH-209ENST00000641074 1780 ntBASIC17.43■□□□□ 0.38
RTCAO00442 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.43■□□□□ 0.38
RTCAO00442 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RTCAO00442 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTCAO00442 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 RCN1P1-201ENST00000400413 996 ntBASIC17.43■□□□□ 0.38
RTCAO00442 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.43■□□□□ 0.38
RTCAO00442 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.43■□□□□ 0.38
RTCAO00442 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.43■□□□□ 0.38
RTCAO00442 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.43■□□□□ 0.38
RTCAO00442 AC009065.1-201ENST00000564055 1225 ntBASIC17.43■□□□□ 0.38
RTCAO00442 RN7SL850P-201ENST00000579959 291 ntBASIC17.43■□□□□ 0.38
RTCAO00442 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.43■□□□□ 0.38
RTCAO00442 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.43■□□□□ 0.38
RTCAO00442 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
RTCAO00442 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.43■□□□□ 0.38
RTCAO00442 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.43■□□□□ 0.38
RTCAO00442 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTCAO00442 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RTCAO00442 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RTCAO00442 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.42■□□□□ 0.38
RTCAO00442 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 AL024508.2-201ENST00000607749 1894 ntBASIC17.42■□□□□ 0.38
RTCAO00442 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RTCAO00442 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.42■□□□□ 0.38
RTCAO00442 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RTCAO00442 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RTCAO00442 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.42■□□□□ 0.38
RTCAO00442 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTCAO00442 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RTCAO00442 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RTCAO00442 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RTCAO00442 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RTCAO00442 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RTCAO00442 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.41■□□□□ 0.38
RTCAO00442 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RTCAO00442 SPDYE15P-201ENST00000424157 909 ntBASIC17.41■□□□□ 0.38
RTCAO00442 AC104076.2-201ENST00000448912 469 ntBASIC17.41■□□□□ 0.38
RTCAO00442 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.41■□□□□ 0.38
RTCAO00442 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.41■□□□□ 0.38
RTCAO00442 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RTCAO00442 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTCAO00442 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTCAO00442 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RTCAO00442 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.41■□□□□ 0.38
RTCAO00442 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.41■□□□□ 0.38
RTCAO00442 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.41■□□□□ 0.38
RTCAO00442 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RTCAO00442 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms