Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.24■□□□□ 0.35
CLIC1O00299 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC1O00299 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.23■□□□□ 0.35
CLIC1O00299 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC1O00299 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLIC1O00299 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLIC1O00299 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC1O00299 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLIC1O00299 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.23■□□□□ 0.35
CLIC1O00299 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.23■□□□□ 0.35
CLIC1O00299 RPS2P55-201ENST00000397318 883 ntBASIC17.23■□□□□ 0.35
CLIC1O00299 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.23■□□□□ 0.35
CLIC1O00299 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC1O00299 AC107956.1-201ENST00000494359 873 ntBASIC17.23■□□□□ 0.35
CLIC1O00299 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.23■□□□□ 0.35
CLIC1O00299 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CLIC1O00299 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.23■□□□□ 0.35
CLIC1O00299 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.23■□□□□ 0.35
CLIC1O00299 REXO1L10P-201ENST00000615707 1290 ntBASIC17.23■□□□□ 0.35
CLIC1O00299 REXO1L12P-201ENST00000622156 912 ntBASIC17.23■□□□□ 0.35
CLIC1O00299 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC1O00299 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC1O00299 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLIC1O00299 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLIC1O00299 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 HOXB1-202ENST00000577092 1414 ntBASIC17.22■□□□□ 0.35
CLIC1O00299 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLIC1O00299 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLIC1O00299 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC1O00299 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLIC1O00299 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 ABHD17AP1-201ENST00000358206 933 ntBASIC17.22■□□□□ 0.35
CLIC1O00299 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.22■□□□□ 0.35
CLIC1O00299 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.22■□□□□ 0.35
CLIC1O00299 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.22■□□□□ 0.35
CLIC1O00299 AC142381.4-202ENST00000563973 229 ntBASIC17.22■□□□□ 0.35
CLIC1O00299 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.22■□□□□ 0.35
CLIC1O00299 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 AP001412.1-201ENST00000608405 714 ntBASIC17.22■□□□□ 0.35
CLIC1O00299 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLIC1O00299 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLIC1O00299 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.22■□□□□ 0.35
CLIC1O00299 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLIC1O00299 AC012317.2-201ENST00000623305 2251 ntBASIC17.22■□□□□ 0.35
CLIC1O00299 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC1O00299 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
CLIC1O00299 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLIC1O00299 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.21■□□□□ 0.35
CLIC1O00299 AC113410.3-201ENST00000623366 203 ntBASIC17.21■□□□□ 0.35
CLIC1O00299 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIC1O00299 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms