Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 MIR3180-4-201ENST00000582223 153 ntBASIC20.75■□□□□ 0.91
VWA3AA6NCI4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VWA3AA6NCI4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 LIN28AP1-201ENST00000429574 405 ntBASIC20.74■□□□□ 0.91
VWA3AA6NCI4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AC009065.1-201ENST00000564055 1225 ntBASIC20.74■□□□□ 0.91
VWA3AA6NCI4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 AL096828.2-201ENST00000567259 1965 ntBASIC20.74■□□□□ 0.91
VWA3AA6NCI4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VWA3AA6NCI4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 AC211429.1-201ENST00000415277 523 ntBASIC20.73■□□□□ 0.91
VWA3AA6NCI4 ATP5G1P1-201ENST00000448724 379 ntBASIC20.73■□□□□ 0.91
VWA3AA6NCI4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 AL023973.1-201ENST00000624619 620 ntBASIC20.73■□□□□ 0.91
VWA3AA6NCI4 LINC01126-201ENST00000623515 1646 ntBASIC20.73■□□□□ 0.91
VWA3AA6NCI4 AC067852.2-201ENST00000590513 2313 ntBASIC20.73■□□□□ 0.91
VWA3AA6NCI4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.73■□□□□ 0.91
VWA3AA6NCI4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 AP000523.1-201ENST00000398242 1049 ntBASIC20.72■□□□□ 0.91
VWA3AA6NCI4 AC113347.1-201ENST00000413321 391 ntBASIC20.72■□□□□ 0.91
VWA3AA6NCI4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 AC005363.2-201ENST00000618631 242 ntBASIC20.72■□□□□ 0.91
VWA3AA6NCI4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.72■□□□□ 0.91
VWA3AA6NCI4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms