Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC24.65■■□□□ 1.54
SBNO1A3KN83 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 AC007967.2-201ENST00000432613 625 ntBASIC24.65■■□□□ 1.54
SBNO1A3KN83 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.65■■□□□ 1.54
SBNO1A3KN83 AP000867.4-201ENST00000641616 219 ntBASIC24.65■■□□□ 1.54
SBNO1A3KN83 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC24.65■■□□□ 1.54
SBNO1A3KN83 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
SBNO1A3KN83 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SBNO1A3KN83 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.64■■□□□ 1.54
SBNO1A3KN83 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SBNO1A3KN83 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SBNO1A3KN83 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC24.64■■□□□ 1.54
SBNO1A3KN83 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
SBNO1A3KN83 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SBNO1A3KN83 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.64■■□□□ 1.53
SBNO1A3KN83 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SBNO1A3KN83 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
SBNO1A3KN83 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SBNO1A3KN83 KRT18P65-201ENST00000439811 1286 ntBASIC24.64■■□□□ 1.53
SBNO1A3KN83 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.64■■□□□ 1.53
SBNO1A3KN83 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SBNO1A3KN83 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.64■■□□□ 1.53
SBNO1A3KN83 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC24.64■■□□□ 1.53
SBNO1A3KN83 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SBNO1A3KN83 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SBNO1A3KN83 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SBNO1A3KN83 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SBNO1A3KN83 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.63■■□□□ 1.53
SBNO1A3KN83 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC24.63■■□□□ 1.53
SBNO1A3KN83 KRT18P27-201ENST00000427733 1299 ntBASIC24.63■■□□□ 1.53
SBNO1A3KN83 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.63■■□□□ 1.53
SBNO1A3KN83 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.63■■□□□ 1.53
SBNO1A3KN83 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.63■■□□□ 1.53
SBNO1A3KN83 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.63■■□□□ 1.53
SBNO1A3KN83 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SBNO1A3KN83 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 AC005332.7-201ENST00000614046 2005 ntBASIC24.62■■□□□ 1.53
SBNO1A3KN83 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 BEX3-201ENST00000361298 921 ntTSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SBNO1A3KN83 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
SBNO1A3KN83 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.61■■□□□ 1.53
SBNO1A3KN83 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SBNO1A3KN83 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SBNO1A3KN83 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SBNO1A3KN83 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 SRP19-202ENST00000445150 833 ntTSL 2 BASIC24.6■■□□□ 1.53
SBNO1A3KN83 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC24.6■■□□□ 1.53
SBNO1A3KN83 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC24.6■■□□□ 1.53
SBNO1A3KN83 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
SBNO1A3KN83 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 MTDHP5-201ENST00000598980 586 ntBASIC24.6■■□□□ 1.53
SBNO1A3KN83 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
SBNO1A3KN83 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms