Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 RNF126P1-202ENST00000569893 925 ntBASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IGHV4-28A0A0C4DH34 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 Z83836.1-201ENST00000624605 1642 ntBASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 CROCCP1-201ENST00000426910 5675 ntBASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 HCG4P8-203ENST00000443049 980 ntBASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 TSSC2-201ENST00000450217 709 ntBASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV4-28A0A0C4DH34 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 AL031598.1-201ENST00000561511 1773 ntBASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 KRT8P26-201ENST00000534154 1276 ntBASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC005332.3-201ENST00000589904 676 ntBASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
IGHV4-28A0A0C4DH34 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms