Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 AC099343.3-201ENST00000605834 2503 ntBASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV1A0A0A0MS02 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 TSPY14P-201ENST00000303979 915 ntBASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 AC010653.2-201ENST00000623505 997 ntBASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 CYP2D8P-201ENST00000433633 1490 ntBASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 BICD1-207ENST00000551848 1962 ntBASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV1A0A0A0MS02 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 KRT8P9-201ENST00000558927 1449 ntBASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV1A0A0A0MS02 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV1A0A0A0MS02 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV1A0A0A0MS02 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.25□□□□□ -0.29
TRGV1A0A0A0MS02 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.25□□□□□ -0.29
TRGV1A0A0A0MS02 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV1A0A0A0MS02 ABALON-201ENST00000629058 1903 ntBASIC13.25□□□□□ -0.29
TRGV1A0A0A0MS02 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms