Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 PKD1P1-201ENST00000458669 6805 ntBASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 ECEL1P2-202ENST00000465689 757 ntBASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 KRT8P3-201ENST00000519669 1449 ntBASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 AC007663.1-201ENST00000438948 1240 ntBASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 AL353719.1-201ENST00000566847 864 ntBASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 AL023803.3-201ENST00000615559 522 ntBASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV26-1A0A087WT03 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 AC092338.2-201ENST00000568827 1415 ntBASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 INGX-201ENST00000359239 846 ntBASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 AP003041.3-201ENST00000527151 707 ntBASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 AC097493.4-201ENST00000641197 219 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms