Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST4Q9Y661 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST4Q9Y661 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 KRT8P26-201ENST00000534154 1276 ntBASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 AL353692.3-201ENST00000407031 1396 ntBASIC18.77■□□□□ 0.6
HS3ST4Q9Y661 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HS3ST4Q9Y661 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HS3ST4Q9Y661 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HS3ST4Q9Y661 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HS3ST4Q9Y661 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 LINC00167-201ENST00000530583 1419 ntBASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 UPK3BP1-201ENST00000428678 509 ntBASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 LINC00602-201ENST00000629776 2065 ntBASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 AC016734.2-201ENST00000624325 1377 ntBASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HS3ST4Q9Y661 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms