Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 AC010460.3-201ENST00000511359 1579 ntBASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC27.51■■□□□ 1.99
CDC42BPBQ9Y5S2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 AC004967.1-201ENST00000453589 447 ntBASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 AC105339.3-201ENST00000560043 636 ntBASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 DNAJB3-202ENST00000449667 1266 ntBASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 AL355385.1-201ENST00000606123 409 ntBASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 AC132938.6-201ENST00000623828 1655 ntBASIC27.5■■□□□ 1.99
CDC42BPBQ9Y5S2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 INIP-202ENST00000374236 874 ntTSL 2 BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
CDC42BPBQ9Y5S2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 PCDHAC2-203ENST00000615316 3011 ntBASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 AC073592.4-201ENST00000623827 446 ntBASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CDC42BPBQ9Y5S2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 SIGLEC16-201ENST00000599858 1437 ntBASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 RNA5SP416-201ENST00000516838 111 ntBASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 AC002347.1-201ENST00000569543 541 ntBASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPBQ9Y5S2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 AP000867.4-201ENST00000641616 219 ntBASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 PMPCAP1-201ENST00000508114 1576 ntBASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 AC005082.1-201ENST00000413042 2259 ntBASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC27.46■■□□□ 1.99
CDC42BPBQ9Y5S2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms