Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 AL645929.1-201ENST00000420084 975 ntBASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 HLA-F-220ENST00000434407 884 ntBASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 AL391807.1-203ENST00000604392 2365 ntBASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A3BPQ9Y5P4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 AC007613.1-201ENST00000572811 2597 ntBASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 AL354751.1-201ENST00000412768 1863 ntBASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 MIR149-201ENST00000384879 89 ntBASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A3BPQ9Y5P4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 AC009102.3-201ENST00000623118 1491 ntBASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A3BPQ9Y5P4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms