Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 HBZP1-201ENST00000354915 429 ntBASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 RASA4DP-201ENST00000460726 1199 ntBASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AC104390.1-201ENST00000555663 520 ntBASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AC126763.1-201ENST00000552015 2118 ntBASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 KRT18P41-201ENST00000518924 1277 ntBASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 AC069148.1-201ENST00000608741 768 ntBASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 AC012183.1-201ENST00000625197 499 ntBASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HRH3Q9Y5N1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 HCG4P8-203ENST00000443049 980 ntBASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 MIR3917-201ENST00000580971 93 ntBASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.86■□□□□ 0.29
HRH3Q9Y5N1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms