Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 SLC25A1P2-201ENST00000430693 912 ntBASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 SLC25A3P1-201ENST00000443844 931 ntBASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 MCCD1P1-208ENST00000445732 328 ntBASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB3Q9Y5G1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 AL137013.1-201ENST00000432946 1228 ntBASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 AC073508.3-201ENST00000619697 1419 ntBASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB3Q9Y5G1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 TSPY17P-201ENST00000450329 467 ntBASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 RN7SL850P-201ENST00000579959 291 ntBASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 KRT8P45-201ENST00000414328 1447 ntBASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms