Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 CR769767.2-201ENST00000622735 460 ntBASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 HBZP1-201ENST00000354915 429 ntBASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FNDC3AQ9Y2H6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 AL109659.2-201ENST00000606809 1674 ntBASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 AL645929.1-201ENST00000420084 975 ntBASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 MIR3180-5-201ENST00000583743 153 ntBASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.66■□□□□ 0.58
FNDC3AQ9Y2H6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 AL031598.1-201ENST00000561511 1773 ntBASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC3AQ9Y2H6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms