Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 AP000593.1-201ENST00000393668 712 ntBASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 AC074051.2-201ENST00000565115 352 ntBASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 TNXA-203ENST00000507684 2038 ntBASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 AC120498.9-201ENST00000339021 3867 ntBASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX2IPQ9Y2D8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 AC233702.3-201ENST00000578656 1387 ntBASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 AL732292.2-201ENST00000609649 430 ntBASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX2IPQ9Y2D8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 EMBP1-201ENST00000458200 901 ntBASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 AC020763.4-201ENST00000623414 4170 ntBASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX2IPQ9Y2D8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 AL160237.2-201ENST00000556165 472 ntBASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 AC008687.5-201ENST00000593746 558 ntBASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 AC124864.1-201ENST00000623408 392 ntBASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 Z98044.1-201ENST00000632503 1764 ntBASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms