Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.05■■□□□ 1.12
ZC3H4Q9UPT8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.05■■□□□ 1.12
ZC3H4Q9UPT8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
ZC3H4Q9UPT8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.05■■□□□ 1.12
ZC3H4Q9UPT8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.05■■□□□ 1.12
ZC3H4Q9UPT8 AL096865.1-201ENST00000606796 927 ntBASIC22.05■■□□□ 1.12
ZC3H4Q9UPT8 AC009154.2-201ENST00000621177 724 ntBASIC22.05■■□□□ 1.12
ZC3H4Q9UPT8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 TEX21P-204ENST00000641479 1693 ntBASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 AL357033.4-201ENST00000617703 1807 ntBASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.04■■□□□ 1.12
ZC3H4Q9UPT8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 KRT18P41-201ENST00000518924 1277 ntBASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 AC006557.2-201ENST00000592985 1240 ntBASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 AC106028.4-201ENST00000614509 607 ntBASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 AC005593.1-201ENST00000624894 515 ntBASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3H4Q9UPT8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 GABARAPL3-202ENST00000624044 1851 ntBASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 AC108751.1-201ENST00000490852 363 ntBASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3H4Q9UPT8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 Z82202.1-201ENST00000623446 1880 ntBASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 AL512408.1-201ENST00000569378 2000 ntBASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 Z98044.1-201ENST00000632503 1764 ntBASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 BCRP1-201ENST00000444246 691 ntBASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 MTCL1P1-201ENST00000446207 792 ntBASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms