Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 Z97985.1-201ENST00000332270 946 ntBASIC17.27■□□□□ 0.36
LHX6Q9UPM6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 HMGB3P14-201ENST00000494195 599 ntBASIC17.27■□□□□ 0.36
LHX6Q9UPM6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
LHX6Q9UPM6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LHX6Q9UPM6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LHX6Q9UPM6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 KRT18P23-201ENST00000435622 1283 ntBASIC17.26■□□□□ 0.35
LHX6Q9UPM6 FGFR3P6-201ENST00000457012 610 ntBASIC17.26■□□□□ 0.35
LHX6Q9UPM6 RN7SL606P-201ENST00000472779 293 ntBASIC17.26■□□□□ 0.35
LHX6Q9UPM6 AC092910.1-201ENST00000482027 1129 ntBASIC17.26■□□□□ 0.35
LHX6Q9UPM6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 AC011840.4-201ENST00000578471 627 ntBASIC17.26■□□□□ 0.35
LHX6Q9UPM6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
LHX6Q9UPM6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 AC096582.2-201ENST00000510860 516 ntBASIC17.25■□□□□ 0.35
LHX6Q9UPM6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 RNA5SP415-201ENST00000517246 115 ntBASIC17.25■□□□□ 0.35
LHX6Q9UPM6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 MIR3180-5-201ENST00000583743 153 ntBASIC17.25■□□□□ 0.35
LHX6Q9UPM6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX6Q9UPM6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms