Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 AL391807.1-203ENST00000604392 2365 ntBASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 AC016734.2-201ENST00000624325 1377 ntBASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 PRELID1P1-202ENST00000567272 903 ntBASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA1Q9UND3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 AC026396.1-201ENST00000419388 421 ntBASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 HLA-F-220ENST00000434407 884 ntBASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.85■□□□□ 0.29
NPIPA1Q9UND3 ANO7L1-203ENST00000602586 1720 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms