Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 AP000867.3-201ENST00000524675 377 ntBASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 LINC00602-201ENST00000629776 2065 ntBASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN1Q9UMX0 AL138781.2-201ENST00000617896 1843 ntBASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 AC087289.5-201ENST00000586076 3175 ntBASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 DUSP5P1-201ENST00000441325 1139 ntBASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 AC233702.3-201ENST00000578656 1387 ntBASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
UBQLN1Q9UMX0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 LINC00167-201ENST00000530583 1419 ntBASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 AC246785.2-201ENST00000432512 513 ntBASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 VENTXP7-201ENST00000475503 772 ntBASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 AC012615.1-201ENST00000565797 1299 ntBASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 Z69720.1-201ENST00000601483 472 ntBASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 AC009154.2-201ENST00000621177 724 ntBASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN1Q9UMX0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 AC011840.4-201ENST00000578471 627 ntBASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms