Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.56■□□□□ 0.4
ATAD3AQ9NVI7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 REXO1L10P-201ENST00000615707 1290 ntBASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 REXO1L12P-201ENST00000622156 912 ntBASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATAD3AQ9NVI7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 AC009053.2-201ENST00000563701 2365 ntBASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 AC135776.1-201ENST00000319817 2481 ntBASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 AP005242.2-201ENST00000580065 1175 ntBASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 MIR3180-5-201ENST00000583743 153 ntBASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 AC026471.5-201ENST00000615068 467 ntBASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATAD3AQ9NVI7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.53■□□□□ 0.4
ATAD3AQ9NVI7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms