Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PBX2-202ENST00000478678 1320 ntTSL 1 (best)34.36■■■■□ 3.091e-51■■□□□ 12.4
DROSHAQ9NRR4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.451e-51■■□□□ 12.4
DROSHAQ9NRR4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.11■■■□□ 2.412e-6■■□□□ 12.4
DROSHAQ9NRR4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC22.61■■□□□ 1.212e-6■■□□□ 12.4
DROSHAQ9NRR4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.712e-6■■□□□ 12.4
DROSHAQ9NRR4 FAM83A-208ENST00000536633 3701 ntTSL 2 BASIC14.71□□□□□ -0.052e-6■■□□□ 12.4
DROSHAQ9NRR4 STK11-203ENST00000585748 746 ntTSL 320.82■□□□□ 0.923e-6■■□□□ 12.4
DROSHAQ9NRR4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.942e-9■■□□□ 12.4
DROSHAQ9NRR4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.848e-7■■□□□ 12.4
DROSHAQ9NRR4 TMEM121-203ENST00000552019 366 ntTSL 529.45■■■□□ 2.318e-7■■□□□ 12.4
DROSHAQ9NRR4 TGIF2-206ENST00000560025 923 ntTSL 328.42■■■□□ 2.141e-6■■□□□ 12.4
DROSHAQ9NRR4 TGIF2-204ENST00000558028 638 ntTSL 222.88■■□□□ 1.251e-6■■□□□ 12.4
DROSHAQ9NRR4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.651e-6■■□□□ 12.4
DROSHAQ9NRR4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.541e-6■■□□□ 12.4
DROSHAQ9NRR4 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.411e-6■■□□□ 12.4
DROSHAQ9NRR4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.066e-7■■□□□ 12.4
DROSHAQ9NRR4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.85□□□□□ -0.196e-7■■□□□ 12.4
DROSHAQ9NRR4 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.26e-7■■□□□ 12.4
DROSHAQ9NRR4 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.346e-7■■□□□ 12.4
DROSHAQ9NRR4 MVD-212ENST00000565842 285 ntTSL 337.27■■■■□ 3.561e-8■■□□□ 12.4
DROSHAQ9NRR4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC30.69■■■□□ 2.51e-8■■□□□ 12.4
DROSHAQ9NRR4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC28.67■■■□□ 2.181e-8■■□□□ 12.4
DROSHAQ9NRR4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC26.57■■□□□ 1.841e-8■■□□□ 12.4
DROSHAQ9NRR4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.731e-8■■□□□ 12.4
DROSHAQ9NRR4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.143e-6■■□□□ 12.4
DROSHAQ9NRR4 C22orf39-204ENST00000509549 2979 ntTSL 217.94■□□□□ 0.461e-8■■□□□ 12.4
DROSHAQ9NRR4 HIRA-203ENST00000452818 453 ntTSL 517.75■□□□□ 0.431e-8■■□□□ 12.4
DROSHAQ9NRR4 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC15.2■□□□□ 0.021e-8■■□□□ 12.4
DROSHAQ9NRR4 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.13e-6■■□□□ 12.4
DROSHAQ9NRR4 JPT2-205ENST00000562569 458 ntTSL 310.92□□□□□ -0.661e-8■■□□□ 12.4
DROSHAQ9NRR4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.89□□□□□ -1.153e-6■■□□□ 12.4
DROSHAQ9NRR4 UBE2K-205ENST00000510719 566 ntTSL 313.41□□□□□ -0.261e-8■■□□□ 12.4
DROSHAQ9NRR4 ARFGAP1-209ENST00000518794 2727 ntTSL 1 (best)25.62■■□□□ 1.694e-10■■□□□ 12.4
DROSHAQ9NRR4 UBE2Z-205ENST00000508468 573 ntTSL 334.59■■■■□ 3.133e-6■■□□□ 12.4
DROSHAQ9NRR4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.073e-6■■□□□ 12.4
DROSHAQ9NRR4 YWHAZ-217ENST00000521328 511 ntTSL 516.28■□□□□ 0.21e-6■■□□□ 12.3
DROSHAQ9NRR4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC47.18■■■■■ 5.141e-7■■□□□ 12.3
DROSHAQ9NRR4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC45.77■■■■■ 4.921e-7■■□□□ 12.3
DROSHAQ9NRR4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.091e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC36.85■■■■□ 3.491e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-201ENST00000369973 2358 ntTSL 534.98■■■■□ 3.191e-7■■□□□ 12.3
DROSHAQ9NRR4 MAP2K1-202ENST00000425818 1338 ntTSL 534.07■■■■□ 3.041e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-210ENST00000598691 594 ntTSL 531.39■■■□□ 2.621e-7■■□□□ 12.3
DROSHAQ9NRR4 UQCR11-205ENST00000593264 409 ntTSL 330.39■■■□□ 2.454e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-210ENST00000455690 784 ntTSL 330.04■■■□□ 2.41e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-214ENST00000564379 2354 ntTSL 229.91■■■□□ 2.381e-7■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-206ENST00000582449 1518 ntTSL 229.9■■■□□ 2.381e-7■■□□□ 12.3
DROSHAQ9NRR4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC29.14■■■□□ 2.254e-12■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.191e-7■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-201ENST00000358156 572 ntTSL 428.65■■■□□ 2.181e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC28.52■■■□□ 2.161e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC27.72■■■□□ 2.031e-7■■□□□ 12.3
DROSHAQ9NRR4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.944e-12■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-208ENST00000444230 1125 ntTSL 526.86■■□□□ 1.891e-7■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-207ENST00000583836 561 ntTSL 526.8■■□□□ 1.881e-7■■□□□ 12.3
DROSHAQ9NRR4 NT5DC2-215ENST00000492555 2004 ntTSL 1 (best)26.51■■□□□ 1.831e-7■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC26.31■■□□□ 1.81e-7■■□□□ 12.3
DROSHAQ9NRR4 PRDM10-206ENST00000527581 620 ntTSL 325.87■■□□□ 1.731e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC25.3■■□□□ 1.641e-7■■□□□ 12.3
DROSHAQ9NRR4 UAP1-206ENST00000476240 128 ntTSL 225.11■■□□□ 1.614e-12■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC24.6■■□□□ 1.531e-7■■□□□ 12.3
DROSHAQ9NRR4 NT5DC2-213ENST00000489316 772 ntTSL 524.35■■□□□ 1.491e-7■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-204ENST00000452355 1357 ntTSL 524.32■■□□□ 1.481e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-212ENST00000563805 992 ntTSL 324.3■■□□□ 1.481e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.381e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-207ENST00000562163 473 ntTSL 423.4■■□□□ 1.341e-7■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-208ENST00000585202 1359 ntTSL 322.53■■□□□ 1.21e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC22.24■■□□□ 1.151e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.99■■□□□ 1.111e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-207ENST00000443220 1175 ntTSL 221.84■■□□□ 1.091e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-206ENST00000437278 862 ntTSL 521.73■■□□□ 1.071e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-209ENST00000598502 3695 ntTSL 1 (best)21.44■■□□□ 1.021e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-205ENST00000561959 558 ntTSL 521.33■■□□□ 11e-7■■□□□ 12.3
DROSHAQ9NRR4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.961e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-207ENST00000596338 3993 ntTSL 220.63■□□□□ 0.891e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-205ENST00000595519 3702 ntTSL 1 (best)20.59■□□□□ 0.891e-7■■□□□ 12.3
DROSHAQ9NRR4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.56■□□□□ 0.881e-19■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-210ENST00000591409 583 ntTSL 320.3■□□□□ 0.841e-7■■□□□ 12.3
DROSHAQ9NRR4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.831e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-213ENST00000477274 705 ntTSL 519.99■□□□□ 0.791e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-211ENST00000598697 3349 ntTSL 219.97■□□□□ 0.791e-7■■□□□ 12.3
DROSHAQ9NRR4 NT5DC2-212ENST00000487779 536 ntTSL 319.45■□□□□ 0.71e-7■■□□□ 12.3
DROSHAQ9NRR4 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.691e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-207ENST00000588422 507 ntTSL 218.89■□□□□ 0.611e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.61e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC18.67■□□□□ 0.581e-7■■□□□ 12.3
DROSHAQ9NRR4 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.541e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-205ENST00000586932 667 ntTSL 218.42■□□□□ 0.541e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC18.37■□□□□ 0.531e-7■■□□□ 12.3
DROSHAQ9NRR4 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.51e-7■■□□□ 12.3
DROSHAQ9NRR4 SPC25-203ENST00000472216 754 ntTSL 517.68■□□□□ 0.421e-7■■□□□ 12.3
DROSHAQ9NRR4 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC17.46■□□□□ 0.381e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-204ENST00000586513 493 ntTSL 517.02■□□□□ 0.311e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-214ENST00000614624 780 ntTSL 1 (best) BASIC16.64■□□□□ 0.261e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.191e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-227ENST00000570182 3549 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.11e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-208ENST00000588934 501 ntTSL 3 BASIC15.6■□□□□ 0.091e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-229ENST00000617948 3883 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 01e-7■■□□□ 12.3
DROSHAQ9NRR4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.011e-7■■□□□ 12.3
Retrieved 100 of 16,331 protein–RNA pairs in 90.3 ms