Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C12orf4Q9NQ89 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 UNC93B4-201ENST00000505679 747 ntBASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AC004264.1-201ENST00000608354 794 ntBASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.91■□□□□ 0.14
C12orf4Q9NQ89 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 C8orf49-201ENST00000525043 1968 ntBASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 POM121L13P-201ENST00000422362 380 ntBASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 AC069152.1-201ENST00000438030 544 ntBASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 HLA-A-209ENST00000638375 975 ntBASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 NBPF21P-201ENST00000425093 1451 ntBASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C12orf4Q9NQ89 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms