Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLK4Q9HAZ1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 AC008764.6-201ENST00000595909 2069 ntBASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 SLC25A3P1-201ENST00000443844 931 ntBASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 AC008622.2-201ENST00000617006 1229 ntBASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.8■□□□□ 0.44
CLK4Q9HAZ1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 AL023284.2-201ENST00000405850 579 ntBASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 MCCD1P1-208ENST00000445732 328 ntBASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 ECEL1P2-202ENST00000465689 757 ntBASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLK4Q9HAZ1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 AC113347.1-201ENST00000413321 391 ntBASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 AC083906.6-201ENST00000641366 219 ntBASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.78■□□□□ 0.44
CLK4Q9HAZ1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 ESPNP-201ENST00000270691 2015 ntBASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLK4Q9HAZ1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms