Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 KRT8P7-201ENST00000533003 1432 ntBASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 AC139713.2-201ENST00000641328 2723 ntBASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 SLC25A1P2-201ENST00000430693 912 ntBASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 RBM17P1-201ENST00000453646 1190 ntBASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 AC092338.2-201ENST00000568827 1415 ntBASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB1Q9H4B7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 AL024508.2-201ENST00000607749 1894 ntBASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 KRT18P55-202ENST00000578578 1546 ntBASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB1Q9H4B7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 TSPY17P-201ENST00000450329 467 ntBASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TUBB1Q9H4B7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms