Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.93■□□□□ 0.78
HIPK3Q9H422 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 AC012640.2-201ENST00000561606 901 ntBASIC19.93■□□□□ 0.78
HIPK3Q9H422 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 AL356309.3-201ENST00000624132 1934 ntBASIC19.93■□□□□ 0.78
HIPK3Q9H422 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
HIPK3Q9H422 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HIPK3Q9H422 AC125634.1-201ENST00000438758 1403 ntBASIC19.93■□□□□ 0.78
HIPK3Q9H422 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK3Q9H422 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 RPSAP43-201ENST00000402237 625 ntBASIC19.92■□□□□ 0.78
HIPK3Q9H422 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 GPX1P2-201ENST00000429271 606 ntBASIC19.92■□□□□ 0.78
HIPK3Q9H422 KRT18P3-201ENST00000451602 1288 ntBASIC19.92■□□□□ 0.78
HIPK3Q9H422 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 RNA5SP415-201ENST00000517246 115 ntBASIC19.92■□□□□ 0.78
HIPK3Q9H422 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.92■□□□□ 0.78
HIPK3Q9H422 PCDHAC2-203ENST00000615316 3011 ntBASIC19.92■□□□□ 0.78
HIPK3Q9H422 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK3Q9H422 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.91■□□□□ 0.78
HIPK3Q9H422 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.91■□□□□ 0.78
HIPK3Q9H422 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.91■□□□□ 0.78
HIPK3Q9H422 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK3Q9H422 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK3Q9H422 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK3Q9H422 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.91■□□□□ 0.78
HIPK3Q9H422 HMGN1P19-201ENST00000436976 333 ntBASIC19.91■□□□□ 0.78
HIPK3Q9H422 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HIPK3Q9H422 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK3Q9H422 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.91■□□□□ 0.78
HIPK3Q9H422 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 PMS2P2-201ENST00000425039 1128 ntBASIC19.9■□□□□ 0.78
HIPK3Q9H422 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 MIR3687-2-201ENST00000577708 61 ntBASIC19.9■□□□□ 0.78
HIPK3Q9H422 AP001160.2-201ENST00000596071 487 ntBASIC19.9■□□□□ 0.78
HIPK3Q9H422 AC025062.2-201ENST00000605477 670 ntBASIC19.9■□□□□ 0.78
HIPK3Q9H422 AL355385.1-201ENST00000606123 409 ntBASIC19.9■□□□□ 0.78
HIPK3Q9H422 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 MIR3687-1-201ENST00000614492 61 ntBASIC19.9■□□□□ 0.78
HIPK3Q9H422 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.9■□□□□ 0.78
HIPK3Q9H422 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK3Q9H422 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HIPK3Q9H422 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 YBX2P1-201ENST00000394192 760 ntBASIC19.89■□□□□ 0.77
HIPK3Q9H422 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 RPS8P6-201ENST00000426177 609 ntBASIC19.89■□□□□ 0.77
HIPK3Q9H422 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms