Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 TERF1P2-201ENST00000583350 1212 ntBASIC17.43■□□□□ 0.38
VCX3BQ9H321 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 KRT8P45-201ENST00000414328 1447 ntBASIC17.43■□□□□ 0.38
VCX3BQ9H321 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.42■□□□□ 0.38
VCX3BQ9H321 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCX3BQ9H321 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.42■□□□□ 0.38
VCX3BQ9H321 LINC02228-203ENST00000641970 1355 ntBASIC17.41■□□□□ 0.38
VCX3BQ9H321 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 AC091305.1-201ENST00000479476 895 ntBASIC17.41■□□□□ 0.38
VCX3BQ9H321 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.41■□□□□ 0.38
VCX3BQ9H321 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VCX3BQ9H321 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms