Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 AC083849.1-201ENST00000615227 514 ntBASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM60Q9H2L4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM60Q9H2L4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM60Q9H2L4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.64■□□□□ 0.9
TMEM60Q9H2L4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TMEM60Q9H2L4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM60Q9H2L4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 AC093010.1-201ENST00000473625 1624 ntBASIC20.64■□□□□ 0.89
TMEM60Q9H2L4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 AL049597.2-201ENST00000565575 961 ntBASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 NOC2LP1-202ENST00000452600 2235 ntBASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM60Q9H2L4 LINC01311-201ENST00000565162 1445 ntBASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 AC018470.1-201ENST00000624790 3129 ntBASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM60Q9H2L4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms