Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CLPBQ9H078 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPBQ9H078 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPBQ9H078 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPBQ9H078 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.38■□□□□ 0.53
CLPBQ9H078 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 SEC1P-202ENST00000473944 940 ntBASIC18.38■□□□□ 0.53
CLPBQ9H078 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.38■□□□□ 0.53
CLPBQ9H078 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.38■□□□□ 0.53
CLPBQ9H078 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPBQ9H078 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.37■□□□□ 0.53
CLPBQ9H078 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.37■□□□□ 0.53
CLPBQ9H078 KRT18P23-201ENST00000435622 1283 ntBASIC18.37■□□□□ 0.53
CLPBQ9H078 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 AC034232.1-201ENST00000506026 1064 ntBASIC18.37■□□□□ 0.53
CLPBQ9H078 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.37■□□□□ 0.53
CLPBQ9H078 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 AC069148.1-201ENST00000608741 768 ntBASIC18.37■□□□□ 0.53
CLPBQ9H078 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLPBQ9H078 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 KRT8P7-201ENST00000533003 1432 ntBASIC18.37■□□□□ 0.53
CLPBQ9H078 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CLPBQ9H078 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CLPBQ9H078 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CLPBQ9H078 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPBQ9H078 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPBQ9H078 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLPBQ9H078 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
CLPBQ9H078 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPBQ9H078 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLPBQ9H078 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.36■□□□□ 0.53
CLPBQ9H078 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPBQ9H078 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLPBQ9H078 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPBQ9H078 HOXB1-202ENST00000577092 1414 ntBASIC18.36■□□□□ 0.53
CLPBQ9H078 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.36■□□□□ 0.53
CLPBQ9H078 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.36■□□□□ 0.53
CLPBQ9H078 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPBQ9H078 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPBQ9H078 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPBQ9H078 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPBQ9H078 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPBQ9H078 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPBQ9H078 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPBQ9H078 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLPBQ9H078 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLPBQ9H078 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPBQ9H078 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms