Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 AC074051.2-201ENST00000565115 352 ntBASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 AC011840.4-201ENST00000578471 627 ntBASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CRNKL1Q9BZJ0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 AC246785.2-201ENST00000432512 513 ntBASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 KRT17P6-201ENST00000453795 1220 ntBASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 LINC00167-201ENST00000530583 1419 ntBASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CRNKL1Q9BZJ0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 ESPNP-201ENST00000270691 2015 ntBASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 AL845331.1-201ENST00000424978 1190 ntBASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 TNXA-203ENST00000507684 2038 ntBASIC21.67■■□□□ 1.06
CRNKL1Q9BZJ0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 AL353801.3-201ENST00000609898 542 ntBASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 AC009154.2-201ENST00000621177 724 ntBASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CRNKL1Q9BZJ0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 IGHV3-47-201ENST00000425060 335 ntBASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 AC091607.1-201ENST00000490318 1060 ntBASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.65■■□□□ 1.06
CRNKL1Q9BZJ0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms