Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USB1Q9BQ65 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.33■□□□□ 0.2
USB1Q9BQ65 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USB1Q9BQ65 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
USB1Q9BQ65 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
USB1Q9BQ65 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USB1Q9BQ65 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USB1Q9BQ65 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USB1Q9BQ65 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USB1Q9BQ65 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 RASA4DP-201ENST00000460726 1199 ntBASIC16.32■□□□□ 0.2
USB1Q9BQ65 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USB1Q9BQ65 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.32■□□□□ 0.2
USB1Q9BQ65 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ZNF444P1-201ENST00000559497 298 ntBASIC16.31■□□□□ 0.2
USB1Q9BQ65 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 AC008894.3-201ENST00000624324 3103 ntBASIC16.31■□□□□ 0.2
USB1Q9BQ65 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
USB1Q9BQ65 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USB1Q9BQ65 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 KRT18P23-201ENST00000435622 1283 ntBASIC16.3■□□□□ 0.2
USB1Q9BQ65 AC112907.2-201ENST00000448639 330 ntBASIC16.3■□□□□ 0.2
USB1Q9BQ65 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 FAM86EP-206ENST00000510506 987 ntBASIC16.3■□□□□ 0.2
USB1Q9BQ65 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 AC104390.1-201ENST00000555663 520 ntBASIC16.3■□□□□ 0.2
USB1Q9BQ65 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USB1Q9BQ65 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USB1Q9BQ65 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.29■□□□□ 0.2
USB1Q9BQ65 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms