Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.89□□□□□ -0.19
VGLL1Q99990 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VGLL1Q99990 KRT18P6-201ENST00000555540 1265 ntBASIC13.89□□□□□ -0.19
VGLL1Q99990 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.89□□□□□ -0.19
VGLL1Q99990 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
VGLL1Q99990 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.89□□□□□ -0.19
VGLL1Q99990 AC073648.6-201ENST00000641589 218 ntBASIC13.89□□□□□ -0.19
VGLL1Q99990 AL031985.4-201ENST00000642138 673 ntBASIC13.89□□□□□ -0.19
VGLL1Q99990 AC099398.1-201ENST00000567919 2776 ntBASIC13.89□□□□□ -0.19
VGLL1Q99990 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.89□□□□□ -0.19
VGLL1Q99990 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.89□□□□□ -0.19
VGLL1Q99990 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.89□□□□□ -0.19
VGLL1Q99990 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.89□□□□□ -0.19
VGLL1Q99990 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VGLL1Q99990 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 AL109659.2-201ENST00000606809 1674 ntBASIC13.88□□□□□ -0.19
VGLL1Q99990 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.88□□□□□ -0.19
VGLL1Q99990 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
VGLL1Q99990 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.88□□□□□ -0.19
VGLL1Q99990 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.88□□□□□ -0.19
VGLL1Q99990 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VGLL1Q99990 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VGLL1Q99990 FAM207BP-201ENST00000447172 505 ntBASIC13.88□□□□□ -0.19
VGLL1Q99990 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
VGLL1Q99990 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.88□□□□□ -0.19
VGLL1Q99990 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.88□□□□□ -0.19
VGLL1Q99990 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VGLL1Q99990 AC006058.3-201ENST00000606217 1069 ntBASIC13.88□□□□□ -0.19
VGLL1Q99990 AC130371.2-201ENST00000619443 611 ntBASIC13.88□□□□□ -0.19
VGLL1Q99990 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VGLL1Q99990 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.88□□□□□ -0.19
VGLL1Q99990 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.88□□□□□ -0.19
VGLL1Q99990 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VGLL1Q99990 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.88□□□□□ -0.19
VGLL1Q99990 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VGLL1Q99990 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VGLL1Q99990 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
VGLL1Q99990 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 TNRC18P3-201ENST00000441896 2691 ntBASIC13.87□□□□□ -0.19
VGLL1Q99990 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.87□□□□□ -0.19
VGLL1Q99990 AL353807.1-201ENST00000427475 662 ntBASIC13.87□□□□□ -0.19
VGLL1Q99990 AC011506.1-201ENST00000474329 610 ntBASIC13.87□□□□□ -0.19
VGLL1Q99990 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 KRT18P41-201ENST00000518924 1277 ntBASIC13.87□□□□□ -0.19
VGLL1Q99990 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 AC026271.3-201ENST00000571884 352 ntBASIC13.87□□□□□ -0.19
VGLL1Q99990 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.87□□□□□ -0.19
VGLL1Q99990 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 AC008622.2-201ENST00000617006 1229 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms