Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 KRT18P1-202ENST00000452408 1331 ntBASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 MIR3180-1-201ENST00000580374 94 ntBASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 MIR3180-3-201ENST00000584616 94 ntBASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 AC092329.2-201ENST00000598402 547 ntBASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 AL592071.1-201ENST00000611956 408 ntBASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMARCD1Q96GM5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 DRAXINP1-201ENST00000437611 948 ntBASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCD1Q96GM5 LINC00602-201ENST00000629776 2065 ntBASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 TSPY12P-201ENST00000421279 868 ntBASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 RN7SL606P-201ENST00000472779 293 ntBASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 TPSP2-201ENST00000561760 610 ntBASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 LINC00167-201ENST00000530583 1419 ntBASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMARCD1Q96GM5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms