Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 FLJ13224-201ENST00000313737 1514 ntBASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 KRT18P48-201ENST00000434763 852 ntBASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 AL671277.2-201ENST00000458060 996 ntBASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 DUTP2-201ENST00000519164 463 ntBASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CTHRC1Q96CG8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 VENTXP5-201ENST00000523979 775 ntBASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 ZNF444P1-201ENST00000559497 298 ntBASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTHRC1Q96CG8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTHRC1Q96CG8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms