Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF25Q96BH1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF25Q96BH1 MIR3180-5-201ENST00000583743 153 ntBASIC19.25■□□□□ 0.67
RNF25Q96BH1 AP000525.1-201ENST00000608286 694 ntBASIC19.25■□□□□ 0.67
RNF25Q96BH1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF25Q96BH1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF25Q96BH1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF25Q96BH1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF25Q96BH1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF25Q96BH1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF25Q96BH1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF25Q96BH1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF25Q96BH1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.24■□□□□ 0.67
RNF25Q96BH1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF25Q96BH1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF25Q96BH1 AL035696.2-201ENST00000407941 709 ntBASIC19.24■□□□□ 0.67
RNF25Q96BH1 AL390955.1-201ENST00000428694 934 ntBASIC19.24■□□□□ 0.67
RNF25Q96BH1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF25Q96BH1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RNF25Q96BH1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF25Q96BH1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF25Q96BH1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 AC139713.2-201ENST00000641328 2723 ntBASIC19.23■□□□□ 0.67
RNF25Q96BH1 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.23■□□□□ 0.67
RNF25Q96BH1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 MIR718-201ENST00000390190 70 ntBASIC19.23■□□□□ 0.67
RNF25Q96BH1 AP000593.1-201ENST00000393668 712 ntBASIC19.23■□□□□ 0.67
RNF25Q96BH1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 AC092723.2-201ENST00000624955 793 ntBASIC19.23■□□□□ 0.67
RNF25Q96BH1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF25Q96BH1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF25Q96BH1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 REXO1L9P-201ENST00000604264 2108 ntBASIC19.22■□□□□ 0.67
RNF25Q96BH1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 AP003041.3-201ENST00000527151 707 ntBASIC19.22■□□□□ 0.67
RNF25Q96BH1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 AL023803.3-201ENST00000615559 522 ntBASIC19.22■□□□□ 0.67
RNF25Q96BH1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF25Q96BH1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF25Q96BH1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms