Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 AC067852.2-201ENST00000590513 2313 ntBASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 TSPY15P-201ENST00000457163 923 ntBASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CCHCR1Q8TD31 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 FLJ13224-201ENST00000313737 1514 ntBASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 AC012313.1-201ENST00000593393 3059 ntBASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCHCR1Q8TD31 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 AC141586.5-201ENST00000624546 2050 ntBASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCHCR1Q8TD31 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms