Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SRFBP1Q8NEF9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SRFBP1Q8NEF9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SRFBP1Q8NEF9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.38
SRFBP1Q8NEF9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 RNF152P1-201ENST00000397754 604 ntBASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 PVRIG2P-201ENST00000435460 978 ntBASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 HOMER2P1-201ENST00000455653 964 ntBASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 AC139887.4-201ENST00000607877 719 ntBASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 BICD1-207ENST00000551848 1962 ntBASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFBP1Q8NEF9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 STARP1-201ENST00000397973 869 ntBASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 AL441883.1-201ENST00000566170 1045 ntBASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 AC011558.1-201ENST00000623459 338 ntBASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.44■□□□□ 0.38
SRFBP1Q8NEF9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 AK4P3-201ENST00000418260 669 ntBASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 TSPY5P-201ENST00000426936 936 ntBASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 AC117947.1-201ENST00000427448 529 ntBASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 KRT18P57-201ENST00000443599 1254 ntBASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 RASA4DP-201ENST00000460726 1199 ntBASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 AL157888.1-201ENST00000631930 593 ntBASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 AC135050.7-201ENST00000624508 2218 ntBASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFBP1Q8NEF9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms