Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 ESPNP-201ENST00000270691 2015 ntBASIC16.01■□□□□ 0.15
CPEB3Q8NE35 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CPEB3Q8NE35 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CPEB3Q8NE35 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16■□□□□ 0.15
CPEB3Q8NE35 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CPEB3Q8NE35 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16■□□□□ 0.15
CPEB3Q8NE35 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 TMPOP1-202ENST00000424642 1267 ntBASIC16■□□□□ 0.15
CPEB3Q8NE35 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 KRT18P21-201ENST00000515767 1272 ntBASIC16■□□□□ 0.15
CPEB3Q8NE35 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16■□□□□ 0.15
CPEB3Q8NE35 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16■□□□□ 0.15
CPEB3Q8NE35 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16■□□□□ 0.15
CPEB3Q8NE35 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16■□□□□ 0.15
CPEB3Q8NE35 AL157888.1-201ENST00000631930 593 ntBASIC16■□□□□ 0.15
CPEB3Q8NE35 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 BICD1-207ENST00000551848 1962 ntBASIC16■□□□□ 0.15
CPEB3Q8NE35 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPEB3Q8NE35 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CPEB3Q8NE35 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 AC135776.1-201ENST00000319817 2481 ntBASIC15.99■□□□□ 0.15
CPEB3Q8NE35 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 RNF152P1-201ENST00000397754 604 ntBASIC15.99■□□□□ 0.15
CPEB3Q8NE35 AK4P3-201ENST00000418260 669 ntBASIC15.99■□□□□ 0.15
CPEB3Q8NE35 TSPY5P-201ENST00000426936 936 ntBASIC15.99■□□□□ 0.15
CPEB3Q8NE35 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 AC009065.1-201ENST00000564055 1225 ntBASIC15.99■□□□□ 0.15
CPEB3Q8NE35 LINC01238-205ENST00000567549 1107 ntBASIC15.99■□□□□ 0.15
CPEB3Q8NE35 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPEB3Q8NE35 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms