Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC17A8Q8NDX2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC17A8Q8NDX2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 GCSHP2-201ENST00000560971 527 ntBASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC17A8Q8NDX2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SLC17A8Q8NDX2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
SLC17A8Q8NDX2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
SLC17A8Q8NDX2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC17A8Q8NDX2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 HBZP1-201ENST00000354915 429 ntBASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 AL353801.3-201ENST00000609898 542 ntBASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 AC112497.1-201ENST00000624824 639 ntBASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC17A8Q8NDX2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 SPDYE15P-201ENST00000424157 909 ntBASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 KRT18P23-201ENST00000435622 1283 ntBASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 RNA5SP419-201ENST00000515908 135 ntBASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 MIR3180-4-201ENST00000582223 153 ntBASIC20.5■□□□□ 0.87
SLC17A8Q8NDX2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms