Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 RARRES2P10-201ENST00000564312 460 ntBASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 MIR3180-5-201ENST00000583743 153 ntBASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 DGCR10-201ENST00000609839 495 ntBASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 CR392000.1-201ENST00000624770 1228 ntBASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01561Q8N1V8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 HOXB1-202ENST00000577092 1414 ntBASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AC008040.2-201ENST00000461049 708 ntBASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 B3GAT3P1-201ENST00000471720 806 ntBASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AC233263.1-201ENST00000578059 224 ntBASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AC008622.2-201ENST00000617006 1229 ntBASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01561Q8N1V8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms