Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 AL512604.3-201ENST00000569583 964 ntBASIC22.62■■□□□ 1.21
SMC5Q8IY18 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.62■■□□□ 1.21
SMC5Q8IY18 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC5Q8IY18 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 AC093827.2-201ENST00000512654 315 ntBASIC22.61■■□□□ 1.21
SMC5Q8IY18 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 AL138966.2-201ENST00000621997 464 ntBASIC22.61■■□□□ 1.21
SMC5Q8IY18 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 AC012317.2-201ENST00000623305 2251 ntBASIC22.61■■□□□ 1.21
SMC5Q8IY18 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 LINC01568-207ENST00000641790 1380 ntBASIC22.61■■□□□ 1.21
SMC5Q8IY18 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMC5Q8IY18 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SMC5Q8IY18 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMC5Q8IY18 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC22.6■■□□□ 1.21
SMC5Q8IY18 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.59■■□□□ 1.21
SMC5Q8IY18 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMC5Q8IY18 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 LINC00167-201ENST00000530583 1419 ntBASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms