Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 AC026366.1-201ENST00000488803 879 ntBASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 AP003097.1-201ENST00000530657 1135 ntBASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 AL645608.8-201ENST00000606034 2086 ntBASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 OR6D1P-203ENST00000641209 4860 ntBASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 AL096828.2-201ENST00000567259 1965 ntBASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 KRT18P29-201ENST00000397031 1267 ntBASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 AC009053.2-201ENST00000563701 2365 ntBASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM42Q8IWZ5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 POM121L13P-201ENST00000422362 380 ntBASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 UNC93B4-201ENST00000505679 747 ntBASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 AC006058.3-201ENST00000606217 1069 ntBASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 ITM2C-210ENST00000620962 501 ntBASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms